FastQCFastQC Report
Wed 14 May 2025
B-Rt98_S113_L001_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameB-Rt98_S113_L001_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22406
Total Bases6.7 Mbp
Sequences flagged as poor quality0
Sequence length35-301
%GC57

[WARN]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA3081.374631795054896No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA2130.9506382219048469No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA1880.8390609658127287No Hit
ACGCGTGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA1530.6828528072837633No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA1250.557886280460591No Hit
ACGCGCGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA1230.5489600999732215No Hit
ACGCGAGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA1200.5355708292421673No Hit
ACGCGTGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA1190.5311077389984825No Hit
ACGCGTAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA850.37936267071320184No Hit
ACGCGCTGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA830.37043649022583236No Hit
ACGCGATGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA800.3570472194947782No Hit
ACGCGTGGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA790.35258412925109345No Hit
ACGCGAGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA770.343657948763724No Hit
ACGCGAGGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA750.33473176827635454No Hit
ACGCGAAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA730.3258055877889851No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT710.3168794073016156No Hit
ACGCGCAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA700.3124163170579309No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN690.30795322681424614No Hit
ACGCGCGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA650.2901008658395073No Hit
ACGCGTTAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA650.2901008658395073No Hit
ACGCGTTGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA620.2767115951084531No Hit
ACGCGTGGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT610.27224850486476837No Hit
ACGCGTGAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA600.26778541462108363No Hit
ACGCGATGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA590.2633223243773989No Hit
ACGCGCGGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA590.2633223243773989No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATGTCCCGTATGAGTACCAGAGA560.24993305364634472No Hit
ACGCGATAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA550.24546996340266003No Hit
ACGCGCGGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT550.24546996340266003No Hit
ACGCGCTAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA520.23208069267160583No Hit
ACGCGTAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA500.22315451218423635No Hit
ACGCGCAAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA480.21422833169686692No Hit
ACGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA470.20976524145318218No Hit
ACGCGTAAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA460.20530215120949744No Hit
ACGCGCTGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA460.20530215120949744No Hit
ACGCGTCAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA460.20530215120949744No Hit
ACGCGTAGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA440.196375970722128No Hit
ACGCGTGGAACCTTACCAGGGTTTGACATGGGCAGGACCATCCGAGAGAT430.19191288047844327No Hit
ACGCGACAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA430.19191288047844327No Hit
ACGCGTCAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA420.18744979023475855No Hit
ACGCGAGGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT400.1785236097473891No Hit
ACGCGCTAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA390.17406051950370438No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATGTCCCGTATGAGTACCAGAGA390.17406051950370438No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATGTCCCGTATGAGTACCAGAGA390.17406051950370438No Hit
ACGCGAGGAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT380.16959742926001964No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA380.16959742926001964No Hit
ACGCGTTGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA370.1651343390163349No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT370.1651343390163349No Hit
ACGCGATGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA370.1651343390163349No Hit
ACGCGTGGAACCTTACCTGGTCTTGACATCCTCGGAACTTGCCAGAGATG360.16067124877265018No Hit
ACGCGTGAAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA360.16067124877265018No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGTTTCCAGAGA350.15620815852896544No Hit
ACGCGAGGAACCTTACCTGGGCTCGAAATGCTTCTGACCAGCTGTAGAAA340.15174506828528073No Hit
ACGCGCGAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA340.15174506828528073No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATGTCCCGTATGAGTACCAGAGA340.15174506828528073No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACGAGAGA340.15174506828528073No Hit
ACGCGAAAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA340.15174506828528073No Hit
ACGCGTGGAACCTTACCTGGTCTTGACATGTCTGGAATCCCGAAGAGATT330.14728197804159598No Hit
ACGCGAAAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA330.14728197804159598No Hit
ACGCGTGGAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG330.14728197804159598No Hit
ACGCGTCGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA330.14728197804159598No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAATGCTTCTGACCAGCTGTAGAAA320.14281888779791127No Hit
ACGCGAGAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA320.14281888779791127No Hit
ACGCGTGGAACCTTACCTGGTCTTGACATCCTGGGAACCCTGAAGAGATT320.14281888779791127No Hit
ACGCGATAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA310.13835579755422656No Hit
ACGCGCTGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA310.13835579755422656No Hit
ACGCGAGGAACCTTACCAGGGTTTGACATGGGCAGGACCATCCGAGAGAT310.13835579755422656No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT310.13835579755422656No Hit
ACGCGAGGAACCTTACCTGGTCTTGACATGTCTGGAATCCCGAAGAGATT300.13389270731054181No Hit
ACGCGCGGAACCTTACCAGGGTTTGACATGGGCAGGACCATCCGAGAGAT300.13389270731054181No Hit
ACGCGCAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA300.13389270731054181No Hit
ACGCGAAGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA290.1294296170668571No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA290.1294296170668571No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT290.1294296170668571No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACCAGAGA280.12496652682317236No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA280.12496652682317236No Hit
ACGCGTTGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT280.12496652682317236No Hit
ACGCGCAAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA280.12496652682317236No Hit
ACGCGACAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA280.12496652682317236No Hit
ACGCGTTAAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA280.12496652682317236No Hit
ACGCGTAAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA280.12496652682317236No Hit
ACGCGTTAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA270.12050343657948764No Hit
ACGCGAGAAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA270.12050343657948764No Hit
ACGCGCAAAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA270.12050343657948764No Hit
ACGCGAGAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT270.12050343657948764No Hit
ACGCGTAGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT260.11604034633580292No Hit
ACGCGAGGAACCTTACCTGGTCTTGACATCCTCGGAACTTGCCAGAGATG260.11604034633580292No Hit
ACGCGTGGAACCTTACCTGGTCTTGACATCCTCGGAACTTGTCAGAGATG260.11604034633580292No Hit
ACGCGCGGAACCTTACCTGGGCTCGAAATGCTTCTGACCAGCTGTAGAAA260.11604034633580292No Hit
ACGCGCGGAACCTTACCTGGTCTTGACATCCTCGGAACTTGCCAGAGATG250.11157725609211817No Hit
ACGCGTTGAACCTTACCTGGGCTCGAAATGCTTCTGACCAGCTGTAGAAA240.10711416584843346No Hit
ACGCGAGGAACCTTACCTGGTCTTGACATCCCAGGAACCCTTCAGAGATG240.10711416584843346No Hit
ACGCGCCAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA240.10711416584843346No Hit
ACGCGCGGAACCTTACCTGGTCTTGACATGTCTGGAATCCCGAAGAGATT240.10711416584843346No Hit
ACGCGTGGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA230.10265107560474872No Hit
ACGCGATGAACCTTACCAGCCCTTGACATGTCCCGTATGAGTACCAGAGA230.10265107560474872No Hit
ACGCGCCAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA230.10265107560474872No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACACCAGAGA230.10265107560474872No Hit

[OK]Adapter Content

Adapter graph