FastQCFastQC Report
Wed 14 May 2025
B-Rt97_S101_L001_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameB-Rt97_S101_L001_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19248
Total Bases5.3 Mbp
Sequences flagged as poor quality0
Sequence length35-301
%GC56

[WARN]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN15858.234621778886119No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA1530.7948877805486284No Hit
ACGCGTGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA1280.6650041562759768No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA1190.6182460515378221No Hit
ACGCGTGGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA1120.5818786367414797No Hit
ACGCGAGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA980.5091438071487947No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA910.47277639235245217No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACCAGAGA810.4208229426433915No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA810.4208229426433915No Hit
ACGCGTGGAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG790.41043225270157935No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA740.38445552784704906No Hit
ACGCGAGGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA720.3740648379052369No Hit
ACGCGTGAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA680.35328345802161265No Hit
ACGCGTGGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT670.3480881130507066No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACGAGAGA630.3273067331670823No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA610.3169160432252701No Hit
ACGCGTTGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA590.30652535328345804No Hit
ACGCGCGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA570.2961346633416459No Hit
ACGCGTTGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA540.2805486284289277No Hit
ACGCGCGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA540.2805486284289277No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACCAGAGA540.2805486284289277No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA530.2753532834580216No Hit
ACGCGAGGAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG520.27015793848711556No Hit
ACGCGTGAAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA510.2649625935162095No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA510.2649625935162095No Hit
ACGCGCGAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA490.25457190357439735No Hit
ACGCGAGGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT480.24937655860349126No Hit
ACGCGCGGAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG480.24937655860349126No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGTTTCCAGAGA480.24937655860349126No Hit
ACGCGTGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA470.2441812136325852No Hit
ACGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA450.23379052369077308No Hit
ACGCGTGAAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA450.23379052369077308No Hit
ACGCGCGAAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA450.23379052369077308No Hit
ACGCGAGAAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA440.228595178719867No Hit
ACGCGTAGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA440.228595178719867No Hit
ACGCGTTAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA440.228595178719867No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGTTCCAGAGA440.228595178719867No Hit
ACGCGCGGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA440.228595178719867No Hit
ACGCGTGAAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG440.228595178719867No Hit
ACGCGTTAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA430.2233998337489609No Hit
ACGCGAGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA420.21820448877805484No Hit
ACGCGTGAAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT400.20781379883624274No Hit
ACGCGTGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACCAGAGA390.20261845386533667No Hit
ACGCGTAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA370.19222776392352453No Hit
ACGCGTAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA370.19222776392352453No Hit
ACGCGAGAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA370.19222776392352453No Hit
ACGCGCGAAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA370.19222776392352453No Hit
ACGCGCGAAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT370.19222776392352453No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACCAGAGA360.18703241895261846No Hit
ACGCGATGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA360.18703241895261846No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATGTCCCGTATGAGTACCAGAGA350.1818370739817124No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACACCAGAGA350.1818370739817124No Hit
ACGCGATGAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG350.1818370739817124No Hit
ACGCGTTGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT350.1818370739817124No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACGAGAGA350.1818370739817124No Hit
ACGCGTGGAACCTTACCTGGGTTTGACATGCACAGGACGCATCCAGAGAT350.1818370739817124No Hit
ACGCGATGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT350.1818370739817124No Hit
ACGCGAGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACCAGAGA340.17664172901080633No Hit
ACGCGTTAAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA340.17664172901080633No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATGTCCCGTATGAGTACCAGAGA340.17664172901080633No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACGAGAGA330.17144638403990023No Hit
ACGCGCTAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA310.16105569409808812No Hit
ACGCGAGGAACCTTACCTGGGCTAGAATGCTGGTGGACCGAGGGTGAAAG310.16105569409808812No Hit
ACGCGTTAAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA310.16105569409808812No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGTTCCAGAGA310.16105569409808812No Hit
ACGCGATAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA310.16105569409808812No Hit
ACGCGCTAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA300.15586034912718205No Hit
ACGCGTTGAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG300.15586034912718205No Hit
ACGCGCGGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT300.15586034912718205No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATGTCCCGTATGAGTACCAGAGA290.15066500415627598No Hit
ACGCGATGAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA290.15066500415627598No Hit
ACGCGATAAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA290.15066500415627598No Hit
ACGCGTTAAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG290.15066500415627598No Hit
ACGCGTAGAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA280.14546965918536992No Hit
ACGCGTGGAACCTTACCTGGGCTAGAATGCTGGTGGACCGAGGGTGAAAG280.14546965918536992No Hit
ACGCGATGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACCAGAGA280.14546965918536992No Hit
ACGCGATAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA280.14546965918536992No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACCAGAGA280.14546965918536992No Hit
ACGCGTTAAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACCAGAGA270.14027431421446385No Hit
ACGCGCTAAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA270.14027431421446385No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACGAGAGA270.14027431421446385No Hit
ACGCGTCAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA270.14027431421446385No Hit
ACGCGCGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACCAGAGA270.14027431421446385No Hit
ACGCGCAAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA270.14027431421446385No Hit
ACGCGTAAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA270.14027431421446385No Hit
ACGCGTGGAACCTTACCAGCTTTTGACATGTCTTGGACGGATACCAGAGA260.13507896924355778No Hit
ACGCGCGAAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG260.13507896924355778No Hit
ACGCGTGGAACCTTACCAGGCCTTGACATCCAATGAACTTTCCAGAGATG260.13507896924355778No Hit
ACGCGTAAAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA260.13507896924355778No Hit
ACGCGATGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA260.13507896924355778No Hit
ACGCGATGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA260.13507896924355778No Hit
ACGCGATAAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA260.13507896924355778No Hit
ACGCGCAAAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA260.13507896924355778No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT250.1298836242726517No Hit
ACGCGTGGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA250.1298836242726517No Hit
ACGCGTAAAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA250.1298836242726517No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGATTCCAGAGA250.1298836242726517No Hit
ACGCGCTAAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA250.1298836242726517No Hit
ACGCGTGGAACCTTACCTGGGTTTGACATGCACAGGACGACGGCAGAGAT240.12468827930174563No Hit
ACGCGAGGAACCTTACCAGCTTTTGACATGTCTTGGACGGATACCAGAGA240.12468827930174563No Hit
ACGCGTGGAACCTTACCAGCTTTTGACATGTCCGGTATGGTCGTCAGAGA240.12468827930174563No Hit
ACGCGAGAAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA240.12468827930174563No Hit
ACGCGTAGAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG240.12468827930174563No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT240.12468827930174563No Hit
ACGCGCAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA240.12468827930174563No Hit
ACGCGATAAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACCAGAGA230.11949293433083957No Hit
ACGCGAAGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA230.11949293433083957No Hit
ACGCGTGAAACCTTACCAGCTTTTGACATGTCTTGGACGGATACCAGAGA230.11949293433083957No Hit
ACGCGTAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACGAGAGA230.11949293433083957No Hit
ACGCGTTAAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT230.11949293433083957No Hit
ACGCGAAGAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG230.11949293433083957No Hit
ACGCGAGAAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT230.11949293433083957No Hit
ACGCGTAAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA220.1142975893599335No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGTTTCCAGAGA220.1142975893599335No Hit
ACGCGTGGAACCTTACCTGGTCTTGACATGTCTGGAATCCCGAAGAGATT220.1142975893599335No Hit
ACGCGCAAAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACCAGAGA220.1142975893599335No Hit
ACGCGTAGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT220.1142975893599335No Hit
ACGCGCAAAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA220.1142975893599335No Hit
ACGCGCGGAACCTTACCTGGGTTTGACATGCACAGGACGCATCCAGAGAT220.1142975893599335No Hit
ACGCGCGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGGTTCCAGAGA220.1142975893599335No Hit
ACGCGAGGAACCTTACCTGGGTTTGACATGCACAGGACGCATCCAGAGAT220.1142975893599335No Hit
ACGCGCAAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA220.1142975893599335No Hit
ACGCGTCAAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA220.1142975893599335No Hit
ACGCGTCAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA220.1142975893599335No Hit
ACGCGTTGAACCTTACCTGGGTTTGACATGCACAGGACGCATCCAGAGAT220.1142975893599335No Hit
ACGCGATAAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG210.10910224438902742No Hit
ACGCGTGGAACCTTACCTGGGTTTGACATGCACAGGACGTGCCTAGAGAT210.10910224438902742No Hit
ACGCGTGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGGTTCCAGAGA210.10910224438902742No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGATTCCAGAGA210.10910224438902742No Hit
ACGCGCAAAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG210.10910224438902742No Hit
ACGCGAAGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT200.10390689941812137No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGTTCCAGAGA200.10390689941812137No Hit
ACGCGCGGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA200.10390689941812137No Hit
ACGCGCGAAACCTTACCAGCCCTTGACATGTCCCGTATGAGTACCAGAGA200.10390689941812137No Hit
ACGCGTTAAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACGAGAGA200.10390689941812137No Hit
ACGCGAAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA200.10390689941812137No Hit
ACGCGTCGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA200.10390689941812137No Hit
ACGCGTTAAACCTTACCAGCCCTTGACATCCCGGTCGCGGTTTCCAGAGA200.10390689941812137No Hit

[OK]Adapter Content

Adapter graph