FastQCFastQC Report
Wed 14 May 2025
B-Rt152_S126_L001_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameB-Rt152_S126_L001_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21185
Total Bases6.3 Mbp
Sequences flagged as poor quality0
Sequence length35-301
%GC56

[WARN]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA1740.8213358508378571No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1550.7316497521831484No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA1330.6278026905829596No Hit
ACGCGTGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA1260.5947604437101723No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA1200.5664385178192117No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT1100.519235308000944No Hit
ACGCGTGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA990.4673117772008496No Hit
ACGCGAGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA930.43898985130988905No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA880.4153882464007552No Hit
ACGCGCGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA770.36346471560066085No Hit
ACGCGTGGAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA740.34930375265518054No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT730.3445834316733538No Hit
ACGCGAGGAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA590.2784989379277791No Hit
ACGCGCGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA580.2737786169459523No Hit
ACGCGTGAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA580.2737786169459523No Hit
ACGCGCGAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT560.2643379749822988No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT560.2643379749822988No Hit
ACGCGTAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA540.25489733301864526No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT540.25489733301864526No Hit
ACGCGTGAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT530.2501770120368185No Hit
ACGCGTTAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA510.24073637007316498No Hit
ACGCGTTGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA510.24073637007316498No Hit
ACGCGTGGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA500.2360160490913382No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGTTTCCAGAGA490.23129572810951146No Hit
ACGCGCGGAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA480.22657540712768467No Hit
ACGCGTAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA460.21713476516403118No Hit
ACGCGCTAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA440.2076941232003776No Hit
ACGCGTCAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA440.2076941232003776No Hit
ACGCGCGAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA430.20297380221855088No Hit
ACGCGAGAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT430.20297380221855088No Hit
ACGCGTAAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA420.1982534812367241No Hit
ACGCGATGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA420.1982534812367241No Hit
ACGCGAGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA410.19353316025489734No Hit
ACGCGATGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA400.18881283927307055No Hit
ACGCGATAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA400.18881283927307055No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGTTTCCAGAGA400.18881283927307055No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGTTTCCAGAGA390.1840925182912438No Hit
ACGCGTGGAACCTTACCTGGTCTTGACATGTCAGGAACCCTTCAGAGATG390.1840925182912438No Hit
ACGCGTAGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT380.17937219730941703No Hit
ACGCGTTAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT370.17465187632759027No Hit
ACGCGAGAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA370.17465187632759027No Hit
ACGCGTGAAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA370.17465187632759027No Hit
ACGCGTGGAACCTTACCTGGGCTAGAATGCTGGTGGACCGAGGGTGAAAG330.1557705924002832No Hit
ACGCGAGGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA330.1557705924002832No Hit
ACGCGATGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT320.15105027141845645No Hit
ACGCGTTAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA320.15105027141845645No Hit
ACGCGCGAAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA320.15105027141845645No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT320.15105027141845645No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATGTCCCGTATGAGTACCAGAGA310.1463299504366297No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATGTCCAGGACCGGTCGCAGAGA310.1463299504366297No Hit
ACGCGAGGAACCTTACCTGGGCTTGAACCGCACAGGACCATCTTTGGAAA310.1463299504366297No Hit
ACGCGTTGAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA300.14160962945480293No Hit
ACGCGTGGAACCTTACCTGGGCTAGAATGTTGGGAGACCGTGGGTGAAAG300.14160962945480293No Hit
ACGCGCAAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA300.14160962945480293No Hit
ACGCGTGGAACCTTACCTGGGCTTGAACCGCACAGGACCATCTTTGGAAA290.13688930847297615No Hit
ACGCGCGGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA290.13688930847297615No Hit
ACGCGTCAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT290.13688930847297615No Hit
ACGCGCAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA290.13688930847297615No Hit
ACGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA280.1321689874911494No Hit
ACGCGTAGAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA280.1321689874911494No Hit
ACGCGCAAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT270.12744866650932263No Hit
ACGCGACAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA270.12744866650932263No Hit
ACGCGCGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGTTTCCAGAGA260.12272834552749586No Hit
ACGCGAAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA260.12272834552749586No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA250.1180080245456691No Hit
ACGCGTGGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT250.1180080245456691No Hit
ACGCGTGGAACCTTACCACCTTTTGACATGCCTGGACCGCCGGAGAGATC250.1180080245456691No Hit
ACGCGTGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGTTTCCAGAGA250.1180080245456691No Hit
ACGCGAGGAACCTTACCTGGGCTAGAATGCTGGTGGACCGAGGGTGAAAG240.11328770356384234No Hit
ACGCGAGAAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA240.11328770356384234No Hit
ACGCGTTGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA240.11328770356384234No Hit
ACGCGCGGAACCTTACCTGGGCTTGAACCGCACAGGACCATCTTTGGAAA240.11328770356384234No Hit
ACGCGATAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT240.11328770356384234No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACACCAGAGA230.10856738258201559No Hit
ACGCGATAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA230.10856738258201559No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATATGAACACTTGACGTATGAAC230.10856738258201559No Hit
ACGCGCAAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA230.10856738258201559No Hit
ACGCGCTGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA230.10856738258201559No Hit
ACGCGAAAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA230.10856738258201559No Hit
ACGCGTAAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA230.10856738258201559No Hit
ACGCGATGAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA220.1038470616001888No Hit
ACGCGTCAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA220.1038470616001888No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGATTCCAGAGA220.1038470616001888No Hit
ACGCGTGGAACCTTACCTGGTCTTGACATCCTGGGAACCCTGAAGAGATT220.1038470616001888No Hit

[OK]Adapter Content

Adapter graph