FastQCFastQC Report
Wed 14 May 2025
B-Rt155_S162_L001_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameB-Rt155_S162_L001_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20893
Total Bases6.2 Mbp
Sequences flagged as poor quality0
Sequence length35-301
%GC56

[WARN]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA1600.7658067295266358No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA1200.5743550471449768No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA970.4642703297755229No Hit
ACGCGTGGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA960.4594840377159814No Hit
ACGCGTGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA780.3733307806442349No Hit
ACGCGAGGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA700.33504044416790313No Hit
ACGCGCGGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA660.31589527592973726No Hit
ACGCGTGGAACCTTACCTGGGCTTGAACCGCACAGGACCATCTTTGGAAA650.31110898387019575No Hit
ACGCGCGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA610.2919638156320299No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA600.2871775235724884No Hit
ACGCGTAAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA490.2345283109175322No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAATGTAGTGGAATCCGGCAGAAAC480.2297420188579907No Hit
ACGCGTGAAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA460.22016943473890777No Hit
ACGCGAGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA450.2153831426793663No Hit
ACGCGTTGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA420.20102426650074187No Hit
ACGCGAAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA420.20102426650074187No Hit
ACGCGCGGAACCTTACCTGGGCTTGAACCGCACAGGACCATCTTTGGAAA420.20102426650074187No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAGCACAGTGGACCGGGGTAGAAAT400.19145168238165894No Hit
ACGCGAGAAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA390.18666539032211746No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATGTCCCGTATGAGTACCAGAGA380.18187909826257598No Hit
ACGCGTTAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA370.1770928062030345No Hit
ACGCGTGGAACCTTACCTGGTCTTGACATGTCAGGAACCCTTCAGAGATG360.17230651414349304No Hit
ACGCGCTAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA350.16752022208395156No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT350.16752022208395156No Hit
ACGCGTGGAACCTTACCTGGGCTTGAACCGCACAGGACCAGCTTTGGAAA340.16273393002441008No Hit
ACGCGATGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA340.16273393002441008No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAGCGCACTTGACTAGCTATAGAAA330.15794763796486863No Hit
ACGCGTAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA320.15316134590532712No Hit
ACGCGTGAAACCTTACCTGGGCTTGAACCGCACAGGACCATCTTTGGAAA320.15316134590532712No Hit
ACGCGATAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA310.14837505384578567No Hit
ACGCGCTGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA310.14837505384578567No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACACCAGAGA300.1435887617862442No Hit
ACGCGAGGAACCTTACCTGGGCTCGAAATGTAGTGGAATCCGGCAGAAAC300.1435887617862442No Hit
ACGCGTGGAACCTTACCTGGGTTTGACATGCACAGGACGCCGGTAGAGAT290.1388024697267027No Hit
ACGCGAGGAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT290.1388024697267027No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAATGTAGTGGAATCGGGTGGAAAC290.1388024697267027No Hit
ACGCGATGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA280.13401617766716126No Hit
ACGCGCGAAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA280.13401617766716126No Hit
ACGCGAGGAACCTTACCTGGGCTTGAACCGCACAGGACCATCTTTGGAAA280.13401617766716126No Hit
ACGCGCAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA280.13401617766716126No Hit
ACGCGTAGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA280.13401617766716126No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAATGGAGTGGACCGGAGTAGAAAT270.12922988560761978No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATGTCCCGTATGAGTACCAGAGA270.12922988560761978No Hit
ACGCGAAAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA270.12922988560761978No Hit
ACGCGTGGAACCTTACCTGGGCTAGAATGTCACGCGACCGGAGGTGAAAG260.1244435935480783No Hit
ACGCGTTAAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA250.11965730148853684No Hit
ACGCGCGGAACCTTACCTGGGCTTGAACCGCACAGGACCAGCTTTGGAAA250.11965730148853684No Hit
ACGCGCTAAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA250.11965730148853684No Hit
ACGCGCAAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA250.11965730148853684No Hit
ACGCGTCAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA250.11965730148853684No Hit
ACGCGCAGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA240.11487100942899535No Hit
ACGCGTAAAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA240.11487100942899535No Hit
ACGCGTGGAACCTTACCACCTTTTGACATGCCTGGACCGCCGGAGAGATC240.11487100942899535No Hit
ACGCGCGGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT240.11487100942899535No Hit
ACGCGTTGAACCTTACCTGGGCTTGAACCGCACAGGACCATCTTTGGAAA230.11008471736945388No Hit
ACGCGTGAAACCTTACCTGGGCTCGAAATGTAGTGGAATCCGGCAGAAAC230.11008471736945388No Hit
ACGCGACAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA230.11008471736945388No Hit
ACGCGCCAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA230.11008471736945388No Hit
ACGCGCGAAACCTTACCTGGGCTCGAAATGTAGTGGAATCCGGCAGAAAC220.10529842530991242No Hit
ACGCGTGGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT220.10529842530991242No Hit
ACGCGAGAAACCTTACCTGGGCTTGAACCGCACAGGACCATCTTTGGAAA220.10529842530991242No Hit
ACGCGAGGAACCTTACCTGGTCTTGACATGTCAGGAACCCTTCAGAGATG210.10051213325037094No Hit
ACGCGTCAAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA210.10051213325037094No Hit
ACGCGAGGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT210.10051213325037094No Hit
ACGCGTTGAACCTTACCTGGGCTCGAAATGTAGTGGAATCCGGCAGAAAC210.10051213325037094No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAGCGTAGTGGACTGAGGTAGAAAT210.10051213325037094No Hit

[OK]Adapter Content

Adapter graph