FastQCFastQC Report
Wed 14 May 2025
B-Rt99_S125_L001_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameB-Rt99_S125_L001_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25661
Total Bases7.6 Mbp
Sequences flagged as poor quality0
Sequence length35-301
%GC57

[WARN]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2701.0521803515061767No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA1530.5962355325201668No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA1440.5611628541366276No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA1130.44035696192665913No Hit
ACGCGTGGAACCTTACCAGGGCTTGACATGCACGGTGCACCGCCAGAGAT960.3741085694244184No Hit
ACGCGTGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA920.3585207123650676No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA870.33903589104087917No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGATTCCAGAGA770.30006624839250223No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA710.2766844628034761No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA690.2688905342738007No Hit
ACGCGTGGAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG680.264993570008963No Hit
ACGCGTGAAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA660.25719964147928764No Hit
ACGCGCGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA650.25330267721444993No Hit
ACGCGTGGAACCTTACCTGGGCTAGAATGCTGGTGGACCGAGGGTGAAAG650.25330267721444993No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA640.24940571294961225No Hit
ACGCGTGGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA630.24550874868477457No Hit
ACGCGTGGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT610.2377148201550992No Hit
ACGCGTAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA600.2338178558902615No Hit
ACGCGAGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA560.21822999883091074No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATGTCCAGGACCGGTCGCAGAGA540.21043607030123532No Hit
ACGCGCGGAACCTTACCAGGGCTTGACATGCACGGTGCACCGCCAGAGAT540.21043607030123532No Hit
ACGCGAGGAACCTTACCAGGGCTTGACATGCACGGTGCACCGCCAGAGAT540.21043607030123532No Hit
ACGCGTGGAACCTTACCAGGGTTTGACATGGGCAGGACCATCCGAGAGAT520.20264214177155995No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGATTCCAGAGA520.20264214177155995No Hit
ACGCGTGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA520.20264214177155995No Hit
ACGCGTGAAACCTTACCAGGGCTTGACATGCACGGTGCACCGCCAGAGAT500.19484821324188456No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGTTTCCAGAGA500.19484821324188456No Hit
ACGCGTGGAACCTTACCTGGTCTTGACATCCTGGGAACCCTGAAGAGATT490.19095124897704688No Hit
ACGCGCGAAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA490.19095124897704688No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGATTCCAGAGA490.19095124897704688No Hit
ACGCGTGGAACCTTACCTCGGCTTGACATGCACGTGGTACTGAGGGGAAA460.1792603561825338No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA460.1792603561825338No Hit
ACGCGCGGAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG460.1792603561825338No Hit
ACGCGTTGAACCTTACCAGGGCTTGACATGCACGGTGCACCGCCAGAGAT450.17536339191769612No Hit
ACGCGAGAAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA440.1714664276528584No Hit
ACGCGTGGAACCTTACCAGGGCTTGACATGCACGGTGCAGGGCCGGAGAC440.1714664276528584No Hit
ACGCGTGGAACCTTACCCGGGCTTGAAAGTTAGTGAATGATCCAGAGACG430.16756946338802073No Hit
ACGCGTAAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA420.16367249912318305No Hit
ACGCGTTAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA420.16367249912318305No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACCAGAGA410.15977553485834536No Hit
ACGCGTGAAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA400.15587857059350765No Hit
ACGCGAGGAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG400.15587857059350765No Hit
ACGCGTGGAACCTTACCAGGGTTTGACATGTTCTCGCACCTCTCGGAAAC400.15587857059350765No Hit
ACGCGTGGAACCTTACCAGGGTTTGACATGTTCTCGCACCTCCTGGAAAC390.15198160632866997No Hit
ACGCGATGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA390.15198160632866997No Hit
ACGCGTCAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA390.15198160632866997No Hit
ACGCGAGGAACCTTACCTGGGCTAGAATGCTGGTGGACCGAGGGTGAAAG380.14808464206383226No Hit
ACGCGTAGAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA370.14418767779899458No Hit
ACGCGCGGAACCTTACCTCGGCTTGACATGCACGTGGTACTGAGGGGAAA370.14418767779899458No Hit
ACGCGAGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA370.14418767779899458No Hit
ACGCGCGGAACCTTACCAGGGCTTGACATGCACGGTGCAGGGCCGGAGAC370.14418767779899458No Hit
ACGCGTTAAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA370.14418767779899458No Hit
ACGCGCGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGATTCCAGAGA370.14418767779899458No Hit
ACGCGTGAAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG370.14418767779899458No Hit
ACGCGAGGAACCTTACCTCGGCTTGACATGCACGTGGTACTGAGGGGAAA360.1402907135341569No Hit
ACGCGAGAAACCTTACCAGGGCTTGACATGCACGGTGCACCGCCAGAGAT360.1402907135341569No Hit
ACGCGTGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGATTCCAGAGA360.1402907135341569No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT350.1363937492693192No Hit
ACGCGTGGAACCTTACCAAGGCTTGACATATACCGGAAACGTGCAGAGAT350.1363937492693192No Hit
ACGCGCGGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA350.1363937492693192No Hit
ACGCGCGAAACCTTACCAGGGCTTGACATGCACGGTGCACCGCCAGAGAT340.1324967850044815No Hit
ACGCGTGAAACCTTACCTGGGCTAGAATGCTGGTGGACCGAGGGTGAAAG330.12859982073964382No Hit
ACGCGCGGAACCTTACCTGGGCTAGAATGCTGGTGGACCGAGGGTGAAAG330.12859982073964382No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAATGCTTATGACCAGCTGTAGAAA330.12859982073964382No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATCCCGGTCGCGGATTCCAGAGA330.12859982073964382No Hit
ACGCGCGGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT330.12859982073964382No Hit
ACGCGCGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA320.12470285647480613No Hit
ACGCGAGGAACCTTACCAGGGCTTGACATGCACGGTGCAGGGCCGGAGAC320.12470285647480613No Hit
ACGCGTGGAACCTTACCTGGTCTTGACATCCTGGGAATCCTGTAGAGATA310.12080589220996843No Hit
ACGCGCTAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA310.12080589220996843No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATGTCCCGTATGAGTACCAGAGA310.12080589220996843No Hit
ACGCGAGGAACCTTACCTGGTCTTGACATCCTGGGAACCCTGAAGAGATT310.12080589220996843No Hit
ACGCGAGAAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG310.12080589220996843No Hit
ACGCGAGGAACCTTACCAGGGTTTGACATGGGCAGGACCATCCGAGAGAT310.12080589220996843No Hit
ACGCGCGGAACCTTACCAGGGTTTGACATGGGCAGGACCATCCGAGAGAT310.12080589220996843No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT310.12080589220996843No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATGTCCAGGACCGGTCGCAGAGA300.11690892794513075No Hit
ACGCGTAGAACCTTACCAGGGCTTGACATGCACGGTGCACCGCCAGAGAT300.11690892794513075No Hit
ACGCGTGGAACCTTACCTGGTCTTGACATCCTGGGAATCCCGTAGAGATA290.11301196368029304No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACCAGAGA290.11301196368029304No Hit
ACGCGATAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA290.11301196368029304No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGTTCCAGAGA290.11301196368029304No Hit
ACGCGTGAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA290.11301196368029304No Hit
ACGCGAAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA290.11301196368029304No Hit
ACGCGTGGAACCTTACCAGGGTTTGACATGGAGTCGCACCGCCCAGAGAT280.10911499941545537No Hit
ACGCGCTAAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA280.10911499941545537No Hit
ACGCGAGAAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA280.10911499941545537No Hit
ACGCGAAAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA280.10911499941545537No Hit
ACGCGATAAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA280.10911499941545537No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAATGTAGTGGAATCCGGCAGAAAC270.10521803515061766No Hit
ACGCGCGGAACCTTACCAGGGTTTGACATGTTCTCGCACCTCCTGGAAAC260.10132107088577998No Hit
ACGCGTGAAACCTTACCAGGGCTTGACATGCACGGTGCAGGGCCGGAGAC260.10132107088577998No Hit
ACGCGCGAAACCTTACCTGGGCTAGAATGCTGGTGGACCGAGGGTGAAAG260.10132107088577998No Hit
ACGCGAGGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA260.10132107088577998No Hit
ACGCGTGAAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT260.10132107088577998No Hit
ACGCGATGAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA260.10132107088577998No Hit

[OK]Adapter Content

Adapter graph