FastQCFastQC Report
Wed 14 May 2025
B-Rt154_S150_L001_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameB-Rt154_S150_L001_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26395
Total Bases7.9 Mbp
Sequences flagged as poor quality0
Sequence length35-301
%GC56

[WARN]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA2681.0153438151164993No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA1370.5190376965334343No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA1350.5114605038833112No Hit
ACGCGTGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA1300.4925175222580034No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA970.3674938435309718No Hit
ACGCGTTAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA850.32203068763023296No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN830.3144534949801098No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGATTCCAGAGA810.3068763023299867No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT760.2879333207046789No Hit
ACGCGTGGAACCTTACCAAGGCTTGACATACGCCGGAAAACCGTAGAGAT740.2803561280545558No Hit
ACGCGAGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA720.27277893540443265No Hit
ACGCGCGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA710.2689903390793711No Hit
ACGCGTGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA710.2689903390793711No Hit
ACGCGTAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA700.2652017427543095No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT700.2652017427543095No Hit
ACGCGTCAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA610.23110437582875543No Hit
ACGCGTGGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA600.22731577950369386No Hit
ACGCGCTAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA560.2121613942034476No Hit
ACGCGTGGAACCTTACCAGGGCTTGACATGCCGTGAATCTTCTTGAAAGA540.2045842015533245No Hit
ACGCGATGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA540.2045842015533245No Hit
ACGCGCGGAACCTTACCAAGGCTTGACATACGCCGGAAAACCGTAGAGAT500.18942981625307825No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATGTCCAGGACCGGTCGCAGAGA500.18942981625307825No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGATTCCAGAGA480.18185262360295512No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAATGTTATGGACCGGGGTAGAAAT480.18185262360295512No Hit
ACGCGATAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA470.17806402727789356No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACCAGAGA460.174275430952832No Hit
ACGCGAGGAACCTTACCAAGGCTTGACATACGCCGGAAAACCGTAGAGAT460.174275430952832No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT460.174275430952832No Hit
ACGCGCAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA460.174275430952832No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGATTCCAGAGA460.174275430952832No Hit
ACGCGTGGAACCTTACCTGGTCTTGACATGTCAGAAACCCTTCAGAGATG450.17048683462777042No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT440.16669823830270883No Hit
ACGCGTGAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT430.16290964197764726No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACACCAGAGA430.16290964197764726No Hit
ACGCGCTGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA430.16290964197764726No Hit
ACGCGTGGAACCTTACCACCTTTTGACATGCCTGGACCGCCGGAGAGATC420.1591210456525857No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT420.1591210456525857No Hit
ACGCGTGAAACCTTACCAAGGCTTGACATACGCCGGAAAACCGTAGAGAT410.15533244932752413No Hit
ACGCGCAAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA410.15533244932752413No Hit
ACGCGTTAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT400.1515438530024626No Hit
ACGCGTAAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA390.14775525667740103No Hit
ACGCGTTGAACCTTACCAAGGCTTGACATACGCCGGAAAACCGTAGAGAT380.14396666035233946No Hit
ACGCGCGGAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT380.14396666035233946No Hit
ACGCGCGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA360.13638946770221633No Hit
ACGCGAGGAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT360.13638946770221633No Hit
ACGCGAGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA360.13638946770221633No Hit
ACGCGCGAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT350.13260087137715476No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACGAGAGA350.13260087137715476No Hit
ACGCGTTGAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT350.13260087137715476No Hit
ACGCGAAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA340.1288122750520932No Hit
ACGCGCCAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA320.12123508240197006No Hit
ACGCGCGAAACCTTACCAAGGCTTGACATACGCCGGAAAACCGTAGAGAT320.12123508240197006No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAATGTTATGGACCGGAGTGGAAAC320.12123508240197006No Hit
ACGCGAAAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA320.12123508240197006No Hit
ACGCGTGAAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT320.12123508240197006No Hit
ACGCGTGGAACCTTACCTGGGCTAGAATGCTGGTGGACCGAGGGTGAAAG310.1174464860769085No Hit
ACGCGAGGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA310.1174464860769085No Hit
ACGCGTGGAACCTTACCTGGTCTTGACATGTCAGGAACCCTTCAGAGATG310.1174464860769085No Hit
ACGCGTGGAACCTTACCAGGGTTTGACATGCAGTCGCACCGCTCGTAATG300.11365788975184693No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAATGCAGGAGACCGGGGTAGAAAT300.11365788975184693No Hit
ACGCGTGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGATTCCAGAGA300.11365788975184693No Hit
ACGCGAGAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT300.11365788975184693No Hit
ACGCGTTAAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT290.10986929342678536No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATGTCCAGGACCGGTCGCAGAGA290.10986929342678536No Hit
ACGCGTGAAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA290.10986929342678536No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAGCGCAGTGGACAACGGTAGAAAT290.10986929342678536No Hit
ACGCGTGAAACCTTACCAGGGCTTGACATGCCGTGAATCTTCTTGAAAGA290.10986929342678536No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATGTCCCGTATGAGTACCAGAGA280.1060806971017238No Hit
ACGCGAGGAACCTTACCTGGTCTTGACATGTCAGAAACCCTTCAGAGATG280.1060806971017238No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAATGTTGTGGACCGGGGTAGAAAT280.1060806971017238No Hit
ACGCGTGGAACCTTACCTGGGCTAGAATGCAGAGAGACTGTGGGTGAAAG280.1060806971017238No Hit
ACGCGACAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA270.10229210077666225No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATCCCGGTCGCGGATTCCAGAGA270.10229210077666225No Hit

[OK]Adapter Content

Adapter graph