FastQCFastQC Report
Wed 14 May 2025
B-Rt153_S138_L001_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameB-Rt153_S138_L001_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22705
Total Bases6.7 Mbp
Sequences flagged as poor quality0
Sequence length35-301
%GC56

[WARN]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCGTGGAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA2080.9160977758203039No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA1750.7707553402334287No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA1720.7575423915437128No Hit
ACGCGCGGAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA1670.7355208103941863No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1650.7267121779343757No Hit
ACGCGAGGAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA1610.7090949130147545No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA1310.5769654261175953No Hit
ACGCGTGAAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA860.3787711957718564No Hit
ACGCGTGGAACCTTACCAGGGTTTGACATGCTTTTGCACCACCTTGAAAG840.3699625633120458No Hit
ACGCGCGAAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA820.3611539308522352No Hit
ACGCGTTGAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA770.33913234970270867No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA750.33032371724289805No Hit
ACGCGTGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA740.3259194010129927No Hit
ACGCGAGGAACCTTACCAGGGTTTGACATGCTTTTGCACCACCTTGAAAG720.3171107685531821No Hit
ACGCGAGAAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA660.2906848711737503No Hit
ACGCGCGGAACCTTACCAGGGTTTGACATGCTTTTGCACCACCTTGAAAG650.28628055494384497No Hit
ACGCGCGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA650.28628055494384497No Hit
ACGCGATGAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA640.2818762387139397No Hit
ACGCGAGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA590.2598546575644131No Hit
ACGCGTAGAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA590.2598546575644131No Hit
ACGCGTAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA560.2466417088746972No Hit
ACGCGCTGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA550.2422373926447919No Hit
ACGCGCTGAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA510.22462012772517065No Hit
ACGCGATGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA500.22021581149526537No Hit
ACGCGAAGAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA480.21140717903545472No Hit
ACGCGAAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA480.21140717903545472No Hit
ACGCGTTAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA440.19378991411583352No Hit
ACGCGATAAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA440.19378991411583352No Hit
ACGCGCAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA440.19378991411583352No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAATGGAGTGGACCGGAGTAGAAAT420.1849812816560229No Hit
ACGCGCAGAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA410.1805769654261176No Hit
ACGCGCGGAACCTTACCTGGTCTTGACATGTCAGGAACCCTTCAGAGATG410.1805769654261176No Hit
ACGCGTGGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA390.17176833296630697No Hit
ACGCGAGGAACCTTACCTGGGCTCGAAATGGAGTGGACCGGAGTAGAAAT390.17176833296630697No Hit
ACGCGTGGAACCTTACCAGGGTTTGACATGTTCTCGCACCATCTGGAAAC390.17176833296630697No Hit
ACGCGTCAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA390.17176833296630697No Hit
ACGCGTTAAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA380.16736401673640167No Hit
ACGCGAGGAACCTTACCTGGTCTTGACATGTCAGGAACCCTTCAGAGATG370.16295970050649636No Hit
ACGCGTGAAACCTTACCAGGGTTTGACATGCTTTTGCACCACCTTGAAAG370.16295970050649636No Hit
ACGCGATAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA370.16295970050649636No Hit
ACGCGTGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA370.16295970050649636No Hit
ACGCGTGAAACCTTACCTGGGCTCGAAATGGAGTGGACCGGAGTAGAAAT350.15415106804668577No Hit
ACGCGCGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA350.15415106804668577No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATATGAACACTTGACGTATGAAC340.14974675181678043No Hit
ACGCGATGAACCTTACCAGGGTTTGACATGCTTTTGCACCACCTTGAAAG340.14974675181678043No Hit
ACGCGCGGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA340.14974675181678043No Hit
ACGCGTGGAACCTTACCTGGTCTTGACATGTCAGGAACCCTTCAGAGATG340.14974675181678043No Hit
ACGCGACAAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA330.14534243558687515No Hit
ACGCGCGGAACCTTACCTGGGCTCGAAATGGAGTGGACCGGAGTAGAAAT330.14534243558687515No Hit
ACGCGCGAAACCTTACCAGGGTTTGACATGCTTTTGCACCACCTTGAAAG320.14093811935696984No Hit
ACGCGACAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA320.14093811935696984No Hit
ACGCGTAAAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA320.14093811935696984No Hit
ACGCGCTAAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA320.14093811935696984No Hit
ACGCGTCAAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA320.14093811935696984No Hit
ACGCGTAAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA310.1365338031270645No Hit
ACGCGCTAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA300.13212948689715923No Hit
ACGCGAGAAACCTTACCAGGGTTTGACATGCTTTTGCACCACCTTGAAAG300.13212948689715923No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATATGAACACTTGACGTATGAAC300.13212948689715923No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGTTTCCAGAGA300.13212948689715923No Hit
ACGCGAGGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA290.12772517066725392No Hit
ACGCGTGGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT290.12772517066725392No Hit
ACGCGAAAAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA290.12772517066725392No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAATGTTATGGACCGGAGTGGAAAC290.12772517066725392No Hit
ACGCGCGGAACCTTACCTGGGCTCGAAATGTAGTGGAATCGGGTGGAAAC290.12772517066725392No Hit
ACGCGCTGAACCTTACCAGGGTTTGACATGCTTTTGCACCACCTTGAAAG280.1233208544373486No Hit
ACGCGTGGAACCTTACCAGGGTTTGACATGCTTTTGCACCGCCTTGAAAG280.1233208544373486No Hit
ACGCGCAAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA270.11891653820744329No Hit
ACGCGTTGAACCTTACCAGGGTTTGACATGCTTTTGCACCACCTTGAAAG270.11891653820744329No Hit
ACGCGTGAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA270.11891653820744329No Hit
ACGCGCAGAACCTTACCAGGGTTTGACATGCTTTTGCACCACCTTGAAAG260.11451222197753799No Hit
ACGCGCGAAACCTTACCTGGGCTCGAAATGGAGTGGACCGGAGTAGAAAT260.11451222197753799No Hit
ACGCGAGGAACCTTACCTGGGCTCGAAATGTTATGGACCGGGGTAGAAAT260.11451222197753799No Hit
ACGCGCGGAACCTTACCAGGGTTTGACATGCTTTTGCACCGCCTTGAAAG260.11451222197753799No Hit
ACGCGCAAAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA250.11010790574763268No Hit
ACGCGAGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA250.11010790574763268No Hit
ACGCGAGGAACCTTACCTGGGCTCGAAGCACAGTGGACCGGGGTAGAAAT250.11010790574763268No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACGAGAGA250.11010790574763268No Hit
ACGCGTGGAACCTTACCTGGCCTTGACATCTACGGAATTCTTCAGAGATG250.11010790574763268No Hit
ACGCGCGGAACCTTACCTGGGCTCGAAGCACAGTGGACCGGGGTAGAAAT250.11010790574763268No Hit
ACGCGTGGAACCTTACCTGGTCTTGACATGTCTGGAATCCCGAAGAGATT240.10570358951772736No Hit
ACGCGCGGAACCTTACCAGGGTTTGACATGCAGTCGCACCGCTCGTAATG240.10570358951772736No Hit
ACGCGCGGAACCTTACCAGGGCTTGACATGGGAGGGCCGCGTCCAGAGAT240.10570358951772736No Hit
ACGCGTGGAACCTTACCAGGGTTTGACATGCAGTCGCACCGCTCGTAACG230.10129927328782207No Hit
ACGCGTTGAACCTTACCTGGGCTCGAAATGTTATGGACCGGGGTAGAAAT230.10129927328782207No Hit
ACGCGCGGAACCTTACCTGGGCTCGAAATGTTATGGACCGGGGTAGAAAT230.10129927328782207No Hit

[OK]Adapter Content

Adapter graph