FastQCFastQC Report
Wed 14 May 2025
B-Rt100_S137_L001_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameB-Rt100_S137_L001_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23194
Total Bases6.8 Mbp
Sequences flagged as poor quality0
Sequence length35-301
%GC56

[WARN]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN4481.9315340174182978No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT2180.9398982495472966No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT1730.7458825558334052No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA1610.6941450375097008No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT1610.6941450375097008No Hit
ACGCGTGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA1340.5777356212813659No Hit
ACGCGTGGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA1240.5346210226782788No Hit
ACGCGAGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA1220.5259981029576615No Hit
ACGCGCGGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA1140.49150642407519185No Hit
ACGCGTGAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT1090.4699491247736483No Hit
ACGCGCGAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT1080.4656376649133397No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA1070.461326205053031No Hit
ACGCGAGGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA960.41390014658963525No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA940.40527722686901785No Hit
ACGCGCGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA920.3966543071484005No Hit
ACGCGTGGAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG850.36647408812623955No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT830.35785116840562214No Hit
ACGCGATGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT820.35353970854531347No Hit
ACGCGAGGAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG750.3233594895231525No Hit
ACGCGTAGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT720.31042510994222644No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT720.31042510994222644No Hit
ACGCGTGAAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA700.30180219022160903No Hit
ACGCGAGAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT700.30180219022160903No Hit
ACGCGCGGAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG660.2845563507803742No Hit
ACGCGTTGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA600.25868759161852206No Hit
ACGCGCGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA580.25006467189790466No Hit
ACGCGTGGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT570.24575321203759593No Hit
ACGCGCTAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT560.24144175217728722No Hit
ACGCGTCAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT540.23281883245666984No Hit
ACGCGCGAAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA510.21988445287574374No Hit
ACGCGTTGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA510.21988445287574374No Hit
ACGCGAGGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT500.215572993015435No Hit
ACGCGTGAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA490.21126153315512633No Hit
ACGCGTGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA490.21126153315512633No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA480.20695007329481763No Hit
ACGCGAGGAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT470.20263861343450892No Hit
ACGCGCGAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA460.19832715357420025No Hit
ACGCGAGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA460.19832715357420025No Hit
ACGCGAGGAACCTTACCAGGGTTTGACATGTTCTCGCACCTCTCGGAAAC440.18970423385358284No Hit
ACGCGCGGAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT440.18970423385358284No Hit
ACGCGAGAAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA440.18970423385358284No Hit
ACGCGTGGAACCTTACCAGGGTTTGACATGTTCTCGCACCTCCTGGAAAC430.1853927739932741No Hit
ACGCGATGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA430.1853927739932741No Hit
ACGCGCGGAACCTTACCAGGGTTTGACATGTTCTCGCACCTCTCGGAAAC430.1853927739932741No Hit
ACGCGCGGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT430.1853927739932741No Hit
ACGCGTTGAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG420.1810813141329654No Hit
ACGCGTTAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT420.1810813141329654No Hit
ACGCGCAGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT420.1810813141329654No Hit
ACGCGAAGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT420.1810813141329654No Hit
ACGCGTGGAACCTTACCAGGGTTTGACATGTTCTCGCACCTCTCGGAAAC420.1810813141329654No Hit
ACGCGCGGAACCTTACCAGGGTTTGACATGTTCTCGCACCTCCTGGAAAC410.17676985427265673No Hit
ACGCGTAAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT410.17676985427265673No Hit
ACGCGCGAAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG400.172458394412348No Hit
ACGCGTGGAACCTTACCTGGTCTTGACATCCTGGGAATCCTGTAGAGATA390.16814693455203933No Hit
ACGCGAGAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA390.16814693455203933No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA380.16383547469173063No Hit
ACGCGACAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT370.15952401483142192No Hit
ACGCGTAGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA370.15952401483142192No Hit
ACGCGATAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT370.15952401483142192No Hit
ACGCGCTGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT360.15521255497111322No Hit
ACGCGCAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA360.15521255497111322No Hit
ACGCGATGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA360.15521255497111322No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAGCGCACTTGACTAGCTATAGAAA350.15090109511080452No Hit
ACGCGATGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA350.15090109511080452No Hit
ACGCGAAAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT340.14658963525049581No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAATGCTTCTGACCAGCTGTAGAAA330.1422781753901871No Hit
ACGCGAGGAACCTTACCTGGGCTCGAAGCGCACTTGACTAGCTGTAGAAA330.1422781753901871No Hit
ACGCGCTAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA320.13796671552987844No Hit
ACGCGAAGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA320.13796671552987844No Hit
ACGCGTTAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA320.13796671552987844No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAGCACAGTGGACCGGGGTAGAAAT320.13796671552987844No Hit
ACGCGTGAAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT320.13796671552987844No Hit
ACGCGTGAAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG320.13796671552987844No Hit
ACGCGTAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA310.1336552556695697No Hit
ACGCGAGGAACCTTACCTGGGCTCGAAATGCTTCTGACCAGCTGTAGAAA300.12934379580926103No Hit
ACGCGTCAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA300.12934379580926103No Hit
ACGCGTTAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA300.12934379580926103No Hit
ACGCGCGAAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT300.12934379580926103No Hit
ACGCGAGGAACCTTACCAGGGTTTGACATGTTCTCGCACCTCCTGGAAAC300.12934379580926103No Hit
ACGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA290.12503233594895233No Hit
ACGCGTAGAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG290.12503233594895233No Hit
ACGCGTGGAACCTTACCTGGGCTTGAACCGCTACTGACCAAGGGTAGAAA280.12072087608864361No Hit
ACGCGCGGAACCTTACCTGGTCTTGACATCCTGGGAATCCTGTAGAGATA280.12072087608864361No Hit
ACGCGCAAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT270.11640941622833492No Hit
ACGCGTGGAACCTTACCAGCTTTTGACATGTCCGGTTTGGTCGTCAGAGA270.11640941622833492No Hit
ACGCGTGGAACCTTACCTGGGCTAGAATGCTGGTGGACCGAGGGTGAAAG270.11640941622833492No Hit
ACGCGTGGAACCTTACCAGGGCTTGACATGCACGGTGCAGCCGTAGAGAT270.11640941622833492No Hit
ACGCGAGGAACCTTACCTGGTCTTGACATCCTGGGAATCCTGTAGAGATA270.11640941622833492No Hit
ACGCGCCAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT260.11209795636802622No Hit
ACGCGATAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA260.11209795636802622No Hit
ACGCGATAAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA260.11209795636802622No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGATTCCAGAGA260.11209795636802622No Hit
ACGCGTGAAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT260.11209795636802622No Hit
ACGCGCAAAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA260.11209795636802622No Hit
ACGCGCTGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA260.11209795636802622No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA250.1077864965077175No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA250.1077864965077175No Hit
ACGCGTGGAACCTTACCAGGGTTTGACATCCTCTCGCACCAGGTGGAAAC250.1077864965077175No Hit
ACGCGCAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA250.1077864965077175No Hit
ACGCGTAAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA240.10347503664740881No Hit
ACGCGCTAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA240.10347503664740881No Hit
ACGCGCGGAACCTTACCAGGGCTTGACATGCACGGTGCAGCCGTAGAGAT240.10347503664740881No Hit
ACGCGAGGAACCTTACCTGGGCTCGAAGTGCAGTGCATCGGGGTAGAAAT240.10347503664740881No Hit
ACGCGACAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA240.10347503664740881No Hit
ACGCGAGAAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG240.10347503664740881No Hit
ACGCGTTAAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG240.10347503664740881No Hit
ACGCGCAGAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG240.10347503664740881No Hit

[OK]Adapter Content

Adapter graph