FastQCFastQC Report
Wed 14 May 2025
B-Rt151_S114_L001_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameB-Rt151_S114_L001_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19497
Total Bases5.8 Mbp
Sequences flagged as poor quality0
Sequence length35-301
%GC56

[WARN]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA1951.000153869826127No Hit
ACGCGTGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA1230.6308662871210955No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA1120.5744473508744935No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA1080.5539313740575473No Hit
ACGCGAGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA1010.5180284146278915No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA710.36415858850079497No Hit
ACGCGCGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA690.3539006000923219No Hit
ACGCGTTGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA630.3231266348669026No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT620.31799764066266606No Hit
ACGCGTGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA610.3128686464584295No Hit
ACGCGTAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA570.2923526696414833No Hit
ACGCGTGGAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA510.261578704416064No Hit
ACGCGATGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA500.25644971021182744No Hit
ACGCGTGAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA500.25644971021182744No Hit
ACGCGAAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA490.2513207160075909No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN460.23593373339488127No Hit
ACGCGTAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA450.2308047391906447No Hit
ACGCGAGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA450.2308047391906447No Hit
ACGCGAGGAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA450.2308047391906447No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGTTTCCAGAGA450.2308047391906447No Hit
ACGCGAGAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA440.22567574498640816No Hit
ACGCGTTAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA440.22567574498640816No Hit
ACGCGCGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA430.22054675078217162No Hit
ACGCGATGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA430.22054675078217162No Hit
ACGCGCTGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA430.22054675078217162No Hit
ACGCGCTAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA400.20515976816946196No Hit
ACGCGTGGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA390.20003077396522542No Hit
ACGCGTAAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA380.19490177976098888No Hit
ACGCGCGGAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA370.1897727855567523No Hit
ACGCGTCAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA370.1897727855567523No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT370.1897727855567523No Hit
ACGCGATAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA360.18464379135251577No Hit
ACGCGCAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA350.17951479714827923No Hit
ACGCGATAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA340.17438580294404266No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGTTTCCAGAGA330.1692568087398061No Hit
ACGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA320.16412781453556957No Hit
ACGCGTGGAACCTTACCTGGTCTTGACATGTCAGGAACCCTTCAGAGATG310.15899882033133303No Hit
ACGCGTCAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA300.1538698261270965No Hit
ACGCGTGAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT290.14874083192285992No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT290.14874083192285992No Hit
ACGCGCAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA290.14874083192285992No Hit
ACGCGTGGAACCTTACCTGGTCTTGACATGTCTGGAATCCCGAAGAGATT280.14361183771862338No Hit
ACGCGAGGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA280.14361183771862338No Hit
ACGCGTAGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT280.14361183771862338No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT280.14361183771862338No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATGTCCCGTATGAGTACCAGAGA270.13848284351438683No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATCCCGGTCGCGGTTTCCAGAGA270.13848284351438683No Hit
ACGCGTCGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA270.13848284351438683No Hit
ACGCGCGAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA250.12822485510591372No Hit
ACGCGCGGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA250.12822485510591372No Hit
ACGCGTTGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA250.12822485510591372No Hit
ACGCGCTGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA240.12309586090167718No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA240.12309586090167718No Hit
ACGCGTTAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA240.12309586090167718No Hit
ACGCGTAGAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA240.12309586090167718No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGTTTCCAGAGA240.12309586090167718No Hit
ACGCGAGGAACCTTACCTGGTCTTGACATGTCAGGAACCCTTCAGAGATG230.11796686669744064No Hit
ACGCGTTGAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA230.11796686669744064No Hit
ACGCGCAAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA230.11796686669744064No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAGCACAGTGGACCGGGGTAGAAAT230.11796686669744064No Hit
ACGCGATGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT220.11283787249320408No Hit
ACGCGACAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA220.11283787249320408No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT220.11283787249320408No Hit
ACGCGTGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGTTTCCAGAGA220.11283787249320408No Hit
ACGCGAGGAACCTTACCTGGGCTCGAACGGCTTTGGATCGACGGTGGAAA210.10770887828896752No Hit
ACGCGCTAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA200.10257988408473098No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATGTCCGGGACCGGTCGCAGAGA200.10257988408473098No Hit
ACGCGTGGAACCTTACCTGGGCTAGAATGCTGGTGGACCGAGGGTGAAAG200.10257988408473098No Hit
ACGCGAGGAACCTTACCTGGGCTAGAATGCTGGTGGACCGAGGGTGAAAG200.10257988408473098No Hit
ACGCGTGAAACCTTACCAGGGCTTGACATGCTGCGAATCCTTTTGAAAGA200.10257988408473098No Hit
ACGCGATGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA200.10257988408473098No Hit
ACGCGCAAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA200.10257988408473098No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGATTCCAGAGA200.10257988408473098No Hit

[OK]Adapter Content

Adapter graph