FastQCFastQC Report
Wed 14 May 2025
B-Rt96_S89_L001_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameB-Rt96_S89_L001_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24421
Total Bases7.3 Mbp
Sequences flagged as poor quality0
Sequence length35-301
%GC57

[WARN]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA2300.9418123745956349No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA1310.5364235698783834No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA1120.45862167806396137No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAGCGCACTTGACTAGCTATAGAAA1050.4299578231849638No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAGCACAGTGGACCGGGGTAGAAAT1030.421768150362393No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA990.4053888047172515No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACACCAGAGA950.38900945907211004No Hit
ACGCGTGGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT940.38491462266082466No Hit
ACGCGTGGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA900.3685352770156832No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT900.3685352770156832No Hit
ACGCGTGGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA880.3603456041931125No Hit
ACGCGCGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA870.3562507677818271No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN860.35215593137054174No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAATGCTTATGACCAGCTGTAGAAA800.32758691290282954No Hit
ACGCGCGGAACCTTACCTGGGCTCGAAGCGCACTTGACTAGCTATAGAAA740.30301789443511734No Hit
ACGCGTGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA720.29482822161254657No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATGTCCCGTATGAGTACCAGAGA710.29073338520126124No Hit
ACGCGAGGAACCTTACCTGGGCTCGAAGCGCACTTGACTAGCTATAGAAA650.266164366733549No Hit
ACGCGTGGAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG650.266164366733549No Hit
ACGCGTAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA640.26206953032226366No Hit
ACGCGATGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA600.24569018467712214No Hit
ACGCGCTGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA580.2375005118545514No Hit
ACGCGTGGAACCTTACCTGGGCTTGAACCGCACAGGACCATCTTTGGAAA560.22931083903198068No Hit
ACGCGAGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA550.2252160026206953No Hit
ACGCGCGGAACCTTACCTGGGCTCGAAATGCTTATGACCAGCTGTAGAAA550.2252160026206953No Hit
ACGCGTTAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA550.2252160026206953No Hit
ACGCGCGGAACCTTACCTGGGCTCGAAGCACAGTGGACCGGGGTAGAAAT550.2252160026206953No Hit
ACGCGCGGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA540.22112116620940994No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACCAGAGA530.21702632979812456No Hit
ACGCGTTGAACCTTACCTGGGCTCGAAGCGCACTTGACTAGCTATAGAAA520.2129314933868392No Hit
ACGCGTAAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA510.2088366569755538No Hit
ACGCGAGGAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT500.20474182056426843No Hit
ACGCGCGGAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT500.20474182056426843No Hit
ACGCGTGAAACCTTACCTGGGCTCGAAGCGCACTTGACTAGCTATAGAAA500.20474182056426843No Hit
ACGCGAGGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA490.2006469841529831No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACACCAGAGA490.2006469841529831No Hit
ACGCGAGGAACCTTACCTGGGCTCGAAGCACAGTGGACCGGGGTAGAAAT490.2006469841529831No Hit
ACGCGCGGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA480.1965521477416977No Hit
ACGCGTGGAACCTTACCTGGGCTTGAACCGCACAGGACCAGCTTTAGAAA480.1965521477416977No Hit
ACGCGCTAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA460.18836247491912697No Hit
ACGCGAGGAACCTTACCTGGGCTCGAAATGCTTATGACCAGCTGTAGAAA450.1842676385078416No Hit
ACGCGTCAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA450.1842676385078416No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACGAGAGA440.18017280209655626No Hit
ACGCGCGGAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG430.17607796568527087No Hit
ACGCGCGGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT430.17607796568527087No Hit
ACGCGTGAAACCTTACCTGGGCTCGAAATGCTTATGACCAGCTGTAGAAA430.17607796568527087No Hit
ACGCGCAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA430.17607796568527087No Hit
ACGCGAGGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT420.1719831292739855No Hit
ACGCGTGAAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT420.1719831292739855No Hit
ACGCGCGAAACCTTACCTGGGCTCGAAGCACAGTGGACCGGGGTAGAAAT410.16788829286270013No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATGTCCCGTATGAGTACCAGAGA400.16379345645141477No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACACCAGAGA400.16379345645141477No Hit
ACGCGAGGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA390.15969862004012939No Hit
ACGCGAGGAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG390.15969862004012939No Hit
ACGCGAAGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA390.15969862004012939No Hit
ACGCGTAGAACCTTACCTGGGCTCGAAGCACAGTGGACCGGGGTAGAAAT380.15560378362884403No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATCCCGGTCGCGGACACCAGAGA370.15150894721755867No Hit
ACGCGTGAAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA370.15150894721755867No Hit
ACGCGATGAACCTTACCTGGGCTCGAAGCGCACTTGACTAGCTATAGAAA370.15150894721755867No Hit
ACGCGTTGAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT370.15150894721755867No Hit
ACGCGTTGAACCTTACCTGGGCTCGAAGCACAGTGGACCGGGGTAGAAAT360.14741411080627329No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACGAGAGA360.14741411080627329No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATCCCGGTCGCGAGTACCAGAGA350.14331927439498793No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACGAGAGA350.14331927439498793No Hit
ACGCGATAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA350.14331927439498793No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATGTCCCGTATGAGTACCAGAGA350.14331927439498793No Hit
ACGCGTGAAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG350.14331927439498793No Hit
ACGCGTGGAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCT340.13922443798370254No Hit
ACGCGTTGAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG340.13922443798370254No Hit
ACGCGTTGAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA340.13922443798370254No Hit
ACGCGCGAAACCTTACCTGGGCTCGAAGCGCACTTGACTAGCTATAGAAA340.13922443798370254No Hit
ACGCGTGAAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA340.13922443798370254No Hit
ACGCGTCAAACCTTACCTGGGCTCGAAGCGCACTTGACTAGCTATAGAAA340.13922443798370254No Hit
ACGCGTGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACACCAGAGA330.13512960157241719No Hit
ACGCGCAAAACCTTACCAGCCCTTGACATCCCGGTCGCGGACTCCAGAGA330.13512960157241719No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAATGCTTAGGACCAGCTGTAGAAA330.13512960157241719No Hit
ACGCGCGAAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA330.13512960157241719No Hit
ACGCGTAGAACCTTACCTGGGCTCGAAGCGCACTTGACTAGCTATAGAAA320.13103476516113183No Hit
ACGCGTTGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT320.13103476516113183No Hit
ACGCGTGAAACCTTACCTGGGCTCGAAGCACAGTGGACCGGGGTAGAAAT320.13103476516113183No Hit
ACGCGTGGAACCTTACCTGGGCTTGAACCGCACAGGACCAGCTTCAGAAA310.12693992874984644No Hit
ACGCGTAGAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT300.12284509233856107No Hit
ACGCGTGAAACCTTACCAGCCCTTGACATGTCCCGTATGAGTACCAGAGA300.12284509233856107No Hit
ACGCGTTAAACCTTACCTGGGCTCGAAGCACAGTGGACCGGGGTAGAAAT300.12284509233856107No Hit
ACGCGTTGAACCTTACCTGGGCTCGAAATGCTTATGACCAGCTGTAGAAA300.12284509233856107No Hit
ACGCGTTAAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT290.1187502559272757No Hit
ACGCGCGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA290.1187502559272757No Hit
ACGCGTTAAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT290.1187502559272757No Hit
ACGCGTGAAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT290.1187502559272757No Hit
ACGCGTTGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA290.1187502559272757No Hit
ACGCGTTAAACCTTACCTGGGCTTGACATGCATCGTGTCGCCGGTGAAAG290.1187502559272757No Hit
ACGCGTGGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGA290.1187502559272757No Hit
ACGCGTTGAACCTTACCAGCCCTTGACATGTCCCGTATGAGTACCAGAGA280.11465541951599034No Hit
ACGCGCGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACCAGAGA280.11465541951599034No Hit
ACGCGTAGAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT280.11465541951599034No Hit
ACGCGCTGAACCTTACCTGGGCTCGAAGCGCACTTGACTAGCTATAGAAA280.11465541951599034No Hit
ACGCGCGAAACCTTACCAAGGTTTGACATGCAGGGAAAAGCCGTAGAGAT280.11465541951599034No Hit
ACGCGCTAAACCTTACCTGGGCTCGAAGCGCACTTGACTAGCTATAGAAA270.11056058310470497No Hit
ACGCGTAGAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA270.11056058310470497No Hit
ACGCGATGAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT260.1064657466934196No Hit
ACGCGCGGAACCTTACCTGGGCTCGAAATGCTTAGGACCAGCTGTAGAAA260.1064657466934196No Hit
ACGCGAGGAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACCAGAGA260.1064657466934196No Hit
ACGCGTGGAACCTTACCAGCTCTTGACATGCCCGGTTGGGGGCCGAGAGA260.1064657466934196No Hit
ACGCGCGAAACCTTACCTGGGCTCGAAGCGCAGTGGACCGGGGTAGAAAT260.1064657466934196No Hit
ACGCGCGGAACCTTACCTGGGCTTGAACCGCACAGGACCATCTTTGGAAA260.1064657466934196No Hit
ACGCGCGAAACCTTACCAGCCCTTGACATCCCGGTCGCGGGAACGAGAGA250.10237091028213421No Hit
ACGCGCGGAACCTTACCTGGGCTTGAACCGCACAGGACCAGCTTTAGAAA250.10237091028213421No Hit
ACGCGCGGAACCTTACCTGGGCTTGAACCGCACAGGACCAGCTTCAGAAA250.10237091028213421No Hit
ACGCGAGAAACCTTACCTGGGCTCGAAGCGCACTTGACTAGCTATAGAAA250.10237091028213421No Hit
ACGCGCGAAACCTTACCAGCTTTTGACATGTCCTGGACGGATTGCAGAGA250.10237091028213421No Hit
ACGCGTTAAACCTTACCTGGGCTCGAAGCGCACTTGACTAGCTATAGAAA250.10237091028213421No Hit
ACGCGAGAAACCTTACCTGGGCTTGAACCGCTACTGACCAACGGTAGAAA250.10237091028213421No Hit
ACGCGTGAAACCTTACCTGGGCTTGAACCGCACAGGACCAGCTTTAGAAA250.10237091028213421No Hit
ACGCGTGGAACCTTACCTGGGCTCGAAGCGCAGTGGAATCCGGTGGAAAC250.10237091028213421No Hit

[OK]Adapter Content

Adapter graph